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Secstr_ Struct Reference

a protein secondary structure element. More...

#include <pdbread.h>

List of all members.

Public Attributes
Sectype_	Sectype
	type of secondary structure.
int	No
	serial number of structure.
Str4_	Id
	identifier string.
int	Beg
int	End
	residue nos (1..N).
char	Chid
	chain ID, for begin only.
char	Begaa
char	Endaa
	amino acid 1-letter codes.
char	Begrid
char	Endrid
	insertion codes.
int	Type
	1..10 for helices, -1..1 for sheets, PDB numbering used.
int	Strandno
	number of strands in this sheet.
Str4_	Thisat
Str4_	Otherat
	atom names for beta registration.
char	Thisaa
char	Otheraa
	amino acid codes for beta regs.
int	This
int	Other
	registration AA positions.
char	Thisrid
char	Otherid
char	Otherchid
	ins codes and chain ID for the OTHER.

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Detailed Description

a protein secondary structure element.

Definition at line 131 of file pdbread.h.

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Member Data Documentation

Sectype_ Secstr_::Sectype

type of secondary structure. Definition at line 133 of file pdbread.h.

int Secstr_::No

serial number of structure. Definition at line 134 of file pdbread.h.

Str4_ Secstr_::Id

identifier string. Definition at line 135 of file pdbread.h.

int Secstr_::Beg

Definition at line 136 of file pdbread.h.

int Secstr_::End

residue nos (1..N). Definition at line 136 of file pdbread.h.

char Secstr_::Chid

chain ID, for begin only. Definition at line 137 of file pdbread.h.

char Secstr_::Begaa

Definition at line 138 of file pdbread.h.

char Secstr_::Endaa

amino acid 1-letter codes. Definition at line 138 of file pdbread.h.

char Secstr_::Begrid

Definition at line 139 of file pdbread.h.

char Secstr_::Endrid

insertion codes. Definition at line 139 of file pdbread.h.

int Secstr_::Type

1..10 for helices, -1..1 for sheets, PDB numbering used. Definition at line 140 of file pdbread.h.

int Secstr_::Strandno

number of strands in this sheet. Definition at line 142 of file pdbread.h.

Str4_ Secstr_::Thisat

Definition at line 143 of file pdbread.h.

Str4_ Secstr_::Otherat

atom names for beta registration. Definition at line 143 of file pdbread.h.

char Secstr_::Thisaa

Definition at line 144 of file pdbread.h.

char Secstr_::Otheraa

amino acid codes for beta regs. Definition at line 144 of file pdbread.h.

int Secstr_::This

Definition at line 145 of file pdbread.h.

int Secstr_::Other

registration AA positions. Definition at line 145 of file pdbread.h.

char Secstr_::Thisrid

Definition at line 146 of file pdbread.h.

char Secstr_::Otherid

Definition at line 146 of file pdbread.h.

char Secstr_::Otherchid

ins codes and chain ID for the OTHER. Definition at line 146 of file pdbread.h.

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The documentation for this struct was generated from the following file:

• pdbread.h

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